DisGeNET - a database of gene-disease associations

List of associated variants

Psoriasis, C0033860

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs191667458	USP49	1.000	0.040	6	41829160	intron variant	G/A;T	snv			1
rs2266961	UBE2L3	0.807	0.160	22	21574308	intron variant	C/G	snv		0.18	7
rs181359	UBE2L3	0.882	0.080	22	21574352	intron variant	G/A	snv		0.21	3
rs17052344	UBBP4	1.000	0.040	17	22190937	intron variant	G/A	snv		0.19	1
rs1975974	UBBP4	1.000	0.040	17	22180454	intron variant	A/G	snv		0.18	1
rs1893592	UBASH3A	0.742	0.280	21	42434957	missense variant	A/C;G	snv	0.27; 8.0E-06		12
rs34536443	TYK2	0.667	0.400	19	10352442	missense variant	G/C	snv	2.7E-02	2.8E-02	25
rs12720356	TYK2	0.752	0.360	19	10359299	missense variant	A/C;G	snv	6.1E-02; 4.0E-06		12
rs280519	TYK2	0.752	0.320	19	10362257	splice region variant	A/C;G	snv	0.50		10
rs35018800	TYK2	0.790	0.160	19	10354167	missense variant	G/A	snv	4.6E-03	4.9E-03	9
rs7097656	TSPAN14	0.827	0.120	10	80491075	intron variant	T/C;G	snv			6
rs55823223	TRIM65	1.000	0.040	17	75894282	intron variant	G/A;C	snv			1
rs33980500	TRAF3IP2-AS1 ; TRAF3IP2	0.742	0.200	6	111592059	missense variant	C/T	snv	8.6E-02	9.7E-02	14
rs13210247	TRAF3IP2-AS1 ; TRAF3IP2	0.882	0.280	6	111601517	non coding transcript exon variant	A/G	snv		0.10	3
rs13196377	TRAF3IP2-AS1 ; TRAF3IP2	1.000	0.040	6	111580635	intron variant	G/A;T	snv			1
rs71562294	TRAF3IP2-AS1 ; REV3L	0.925	0.080	6	111484775	non coding transcript exon variant	A/G	snv			2
rs7769061	TRAF3IP2	1.000	0.040	6	111605706	intron variant	A/G	snv		7.2E-02	1
rs28512356	TP63	1.000	0.040	3	189897686	downstream gene variant	C/A;G	snv			1
rs2280714	TNPO3	0.752	0.440	7	128954671	3 prime UTR variant	C/T	snv		0.64	10
rs10036748	TNIP1	0.752	0.360	5	151078585	intron variant	C/A;T	snv			11
rs74817271	TNIP1	0.807	0.120	5	151090412	intron variant	G/A	snv		5.0E-02	6
rs2233278	TNIP1	0.925	0.040	5	151087628	5 prime UTR variant	G/C;T	snv		4.8E-02	2
rs3762999	TNIP1	1.000	0.040	5	151089865	intron variant	C/T	snv		0.49	1
rs4246905	TNFSF15	0.716	0.400	9	114790969	missense variant	T/A;C	snv	0.76		16
rs7848647	TNFSF15	0.732	0.320	9	114806766	upstream gene variant	T/C	snv		0.74	13